BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C04SP1|AL428184
(370 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig327 728 0.0
>3x_Contig327
Length = 1076
Score = 728 bits (366), Expect = 0.0
Identities = 368/370 (99%)
Strand = Plus / Plus
Query: 1 ataatataatttttaatattaggatataataatttaatagatttaactttaatataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ataatataatttttaatattaggatataataatttaatagatttaactttaatataaata 392
Query: 61 acataatatgatttatgtttatgtaaagtacaatctaaattaaatttaatttttaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 acataatatgatttatgtttatgtaaagtacaatctaaattaaatttaatttttaaaata 452
Query: 121 ttaataaaataaattaattctttaatagtatatgattgtaaatttaatgtaatacctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttaataaaataaattaattctttaatagtatatgattgtaaatttaatgtaatacctcca 512
Query: 181 cctttattaaatgaaccatctcctataataatatgagctaatgattcataatttaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cctttattaaatgaaccatctcctataataatatgagctaatgattcataatttaataaa 572
Query: 241 tcatataaatcatttggtataatttttactctaccattataaaamtgatgtcttaattta 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 573 tcatataaatcatttggtataatttttactctaccattataaaaatgatgtcttaattta 632
Query: 301 gtaaaacaaggtaaagctatagtagttatttcaactccataatamattttaccttttaat 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 633 gtaaaacaaggtaaagctatagtagttatttcaactccataataaattttaccttttaat 692
Query: 361 ctttccccgc 370
||||||||||
Sbjct: 693 ctttccccgc 702
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4290
Number of Sequences: 1807
Number of extensions: 4290
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 370
length of database: 10,358,551
effective HSP length: 16
effective length of query: 354
effective length of database: 10,329,639
effective search space: 3656692206
effective search space used: 3656692206
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)